Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
MA_2012Response regulator receiver. (124 aa)    
Predicted Functional Partners:
cheY1
Chemotaxis response regulator.
 
 0.966
cheY2
Chemotaxis response regulator.
 
 0.959
mcp-1
Methyl-accepting chemotaxis protein.
  
 0.946
cheW2
Chemotaxis signal transduction coupling protein.
  
 
 0.925
cheW1
Chemotaxis signal transduction coupling protein.
  
 
 0.925
MA_0863
Sensory transduction histidine kinase.
 
 
 0.917
msmS
Sensory transduction histidine kinase; Heme-binding sensor kinase component part of a two-component regulatory system involved in methyl sulfide metabolism. Does not act as a phytochrome-like photoreceptor.
 
 
 0.911
cheC2
Chemotaxis protein CheC.
    
 0.909
cheC1
Chemotaxis protein CheC.
    
 0.909
cheA2
Chemotaxis sensor histidine kinase.
    
  0.903
Your Current Organism:
Methanosarcina acetivorans
NCBI taxonomy Id: 188937
Other names: M. acetivorans C2A, Methanosarcina acetivorans C2A, Methanosarcina acetivorans str. C2A
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