Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
MA_2024Hypothetical protein (multi-domain); Belongs to the universal ribosomal protein uS17 family. (486 aa)    
Predicted Functional Partners:
rps9
Ribosomal protein S9p; Belongs to the universal ribosomal protein uS9 family.
 
 0.999
rps2
Ribosomal protein S2p; Belongs to the universal ribosomal protein uS2 family.
 
 0.999
rps15
Ribosomal protein S15p.
 
 0.999
rps19
Ribosomal protein S19p; Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA.
 
 0.999
rps3
Ribosomal protein S3p; Binds the lower part of the 30S subunit head. Belongs to the universal ribosomal protein uS3 family.
 
 0.999
rps4e
Ribosomal protein S4e; Belongs to the eukaryotic ribosomal protein eS4 family.
 
 0.999
rps14
Ribosomal protein S14p; Binds 16S rRNA, required for the assembly of 30S particles.
 
 0.999
rps8
Ribosomal protein S8; One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit; Belongs to the universal ribosomal protein uS8 family.
 
 0.999
rps5
Ribosomal protein S5; With S4 and S12 plays an important role in translational accuracy.
 
 0.999
rps11
Ribosomal protein S11p; Located on the platform of the 30S subunit. Belongs to the universal ribosomal protein uS11 family.
 
 0.999
Your Current Organism:
Methanosarcina acetivorans
NCBI taxonomy Id: 188937
Other names: M. acetivorans C2A, Methanosarcina acetivorans C2A, Methanosarcina acetivorans str. C2A
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