STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MA_2103Type I site-specific deoxyribonuclease. (290 aa)    
Predicted Functional Partners:
hsdM
Site-specific DNA-methyltransferase (adenine-specific), subunit M.
 
 
 0.948
MA_2106
Hypothetical protein (multi-domain).
 
 
 0.874
hsdR
Type I site-specific deoxyribonuclease protein R.
 
 
 0.872
MA_2116
Site-specific DNA-methyltransferase (adenine-specific), subunit M.
 
 
 0.866
MA_0485
Hypothetical protein; Contains a restriction-modification enzyme domain.
 
 
 0.833
MA_2122
Type I site-specific deoxyribonuclease.
 
 
 0.671
MA_2451
Hypothetical protein.
 
  
 0.619
MA_3581
Type I site-specific deoxyribonuclease.
  
  
 0.567
MA_2104
Predicted protein.
       0.542
MA_2120
Type I site-specific deoxyribonuclease.
     0.540
Your Current Organism:
Methanosarcina acetivorans
NCBI taxonomy Id: 188937
Other names: M. acetivorans C2A, Methanosarcina acetivorans C2A, Methanosarcina acetivorans str. C2A
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.