Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
MA_2169Dolichyl-phosphate beta-D-mannosyltransferase. (322 aa)    
Predicted Functional Partners:
MA_2170
Glycosyltransferase.
 
  
 0.769
pigA
Phosphatidylinositol glycan-class A.
 
  
 0.711
MA_1177
Polysaccharide ABC transporter, ATP-binding protein.
 
  
 0.560
MA_1176
Polysaccharide ABC transporter, permease protein.
 
  
 0.553
MA_2175
Membrane-bound galactosyl-transferase.
 
  
 0.552
MA_3757
Mannosyltransferase B.
 
  
 0.529
MA_2178
LPS biosynthesis protein.
 
  
 0.517
MA_1186
Hexosyltransferase.
 
  
 0.510
cps
Capsular polysaccharide biosynthesis protein.
     
 0.507
MA_2172
Beta-1,4-galactosyltransferase.
     
 0.507
Your Current Organism:
Methanosarcina acetivorans
NCBI taxonomy Id: 188937
Other names: M. acetivorans C2A, Methanosarcina acetivorans C2A, Methanosarcina acetivorans str. C2A
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