Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
MA_2174Galactoside O-acetyltransferase. (184 aa)    
Predicted Functional Partners:
cps
Capsular polysaccharide biosynthesis protein.
  
  
 0.724
MA_2172
Beta-1,4-galactosyltransferase.
  
  
 0.724
pigA
Phosphatidylinositol glycan-class A.
  
  
 0.724
MA_2170
Glycosyltransferase.
 
   
 0.694
MA_2175
Membrane-bound galactosyl-transferase.
  
  
 0.619
MA_2176
Predicted protein.
  
  
 0.603
MA_2169
Dolichyl-phosphate beta-D-mannosyltransferase.
  
  
 0.495
idh
Myo-inositol 2-dehydrogenase.
 
  
 0.437
Your Current Organism:
Methanosarcina acetivorans
NCBI taxonomy Id: 188937
Other names: M. acetivorans C2A, Methanosarcina acetivorans C2A, Methanosarcina acetivorans str. C2A
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