Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
rbfAGlucose-1-phosphate thymidylyltransferase. (241 aa)    
Predicted Functional Partners:
MA_4460
dTDP-glucose 4,6-dehydratase.
 
 0.977
MA_2186
dTDP-glucose 4,6-dehydratase.
 
 
 0.971
rfbB
dTDP-glucose 4,6-dehydratase.
 
 
 0.971
MA_0241
Phosphomannomutase; Belongs to the phosphohexose mutase family.
  
 
 0.937
pmm
Phosphomannomutase; Belongs to the phosphohexose mutase family.
  
 
 0.937
MA_4457
UDP-glucose 6-dehydrogenase.
  
 
 0.928
MA_4459
UTP-glucose-1-phosphate uridylyltransferase.
 
  
0.925
rfbA
Glucose-1-phosphate thymidylyltransferase.
 
  
0.911
rfbA-3
Glucose-1-phosphate thymidylyltransferase.
  
  
 
0.901
MA_1185
UDP-glucose 4-epimerase.
  
 
 0.873
Your Current Organism:
Methanosarcina acetivorans
NCBI taxonomy Id: 188937
Other names: M. acetivorans C2A, Methanosarcina acetivorans C2A, Methanosarcina acetivorans str. C2A
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