STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rbfAGlucose-1-phosphate thymidylyltransferase. (241 aa)    
Predicted Functional Partners:
MA_2186
dTDP-glucose 4,6-dehydratase.
 
 
 0.977
rfbB
dTDP-glucose 4,6-dehydratase.
 
 
 0.977
MA_0241
Phosphomannomutase; Belongs to the phosphohexose mutase family.
  
 
 0.935
pmm
Phosphomannomutase; Belongs to the phosphohexose mutase family.
  
 
 0.935
eif2B2
Translation initiation factor 2B, subunit 2; Belongs to the eIF-2B alpha/beta/delta subunits family.
   
 0.909
MA_4460
dTDP-glucose 4,6-dehydratase.
 
 
 0.904
eif2A
Translation initiation factor 2, subunit alpha.
   
 0.901
MA_1185
UDP-glucose 4-epimerase.
  
 
 0.889
MA_4464
dTDP-glucose 4,6-dehydratase.
  
 
 0.889
eif2G
Translation initiation factor 2, subunit gamma; eIF-2 functions in the early steps of protein synthesis by forming a ternary complex with GTP and initiator tRNA. Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. EIF2G subfamily.
   
 0.879
Your Current Organism:
Methanosarcina acetivorans
NCBI taxonomy Id: 188937
Other names: M. acetivorans C2A, Methanosarcina acetivorans C2A, Methanosarcina acetivorans str. C2A
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.