Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
MA_2526Beta/gama crystallin family protein. (120 aa)    
Predicted Functional Partners:
MA_4674
Metalloproteinase domain.
  
     0.718
MA_1936
Hypothetical protein (multi-domain).
  
     0.649
MA_3652
Amidinotransferase.
  
     0.624
MA_0326
Quinone reductase.
  
     0.608
MA_1436
Divalent cation transporter.
  
     0.584
MA_0537
c-Myc-responsive protein; Catalyzes the cleavage of the N-glycosidic bond of deoxyribonucleoside 5'-monophosphates to yield deoxyribose 5-phosphate and a purine or pyrimidine base; Belongs to the 2'-deoxynucleoside 5'-phosphate N-hydrolase 1 family.
  
     0.565
neuA
Acylneuraminate cytidylyltransferase.
  
     0.529
MA_1191
Acetyltransferase (GNAT) family protein.
  
     0.524
MA_1165
Conserved hypothetical protein.
  
     0.511
MA_1867
Predicted protein.
  
     0.508
Your Current Organism:
Methanosarcina acetivorans
NCBI taxonomy Id: 188937
Other names: M. acetivorans C2A, Methanosarcina acetivorans C2A, Methanosarcina acetivorans str. C2A
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