Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
MA_0441 | MA_0793 | Hypothetical protein (multi-domain). | Predicted protein. | 0.737 |
MA_0441 | MA_1517 | Hypothetical protein (multi-domain). | Cell surface protein. | 0.655 |
MA_0441 | MA_1572 | Hypothetical protein (multi-domain). | Predicted protein. | 0.743 |
MA_0441 | MA_1576 | Hypothetical protein (multi-domain). | Predicted protein. | 0.744 |
MA_0441 | MA_2241 | Hypothetical protein (multi-domain). | Predicted protein. | 0.656 |
MA_0441 | MA_2560 | Hypothetical protein (multi-domain). | Predicted protein. | 0.535 |
MA_0441 | MA_3710 | Hypothetical protein (multi-domain). | Hypothetical protein. | 0.430 |
MA_0441 | MA_4051 | Hypothetical protein (multi-domain). | Hypothetical protein (multi-domain). | 0.672 |
MA_0441 | MA_4363 | Hypothetical protein (multi-domain). | Cell surface protein. | 0.576 |
MA_0793 | MA_0441 | Predicted protein. | Hypothetical protein (multi-domain). | 0.737 |
MA_0793 | MA_1517 | Predicted protein. | Cell surface protein. | 0.578 |
MA_0793 | MA_1572 | Predicted protein. | Predicted protein. | 0.733 |
MA_0793 | MA_1576 | Predicted protein. | Predicted protein. | 0.732 |
MA_0793 | MA_2241 | Predicted protein. | Predicted protein. | 0.613 |
MA_0793 | MA_2560 | Predicted protein. | Predicted protein. | 0.528 |
MA_0793 | MA_3710 | Predicted protein. | Hypothetical protein. | 0.415 |
MA_0793 | MA_4051 | Predicted protein. | Hypothetical protein (multi-domain). | 0.610 |
MA_0793 | MA_4363 | Predicted protein. | Cell surface protein. | 0.514 |
MA_1517 | MA_0441 | Cell surface protein. | Hypothetical protein (multi-domain). | 0.655 |
MA_1517 | MA_0793 | Cell surface protein. | Predicted protein. | 0.578 |
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