STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MA_2707Cell surface protein. (90 aa)    
Predicted Functional Partners:
MA_3001
Conserved hypothetical protein.
 
     0.700
MA_1195
Conserved hypothetical protein.
  
     0.683
MA_3133
Cell surface protein.
  
     0.682
MA_2706
Cell surface protein.
 
    
0.658
MA_2724
Conserved hypothetical protein.
     0.586
MA_2916
Cell surface protein.
  
     0.549
MA_2886
Cell surface protein.
  
     0.538
MA_0151
Predicted protein.
  
     0.518
MA_4454
Predicted protein.
  
     0.509
MA_0927
Predicted protein.
  
     0.494
Your Current Organism:
Methanosarcina acetivorans
NCBI taxonomy Id: 188937
Other names: M. acetivorans C2A, Methanosarcina acetivorans C2A, Methanosarcina acetivorans str. C2A
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.