Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
vorA2-oxoisovalerate ferredoxin oxidoreductase, alpha subunit. (482 aa)    
Predicted Functional Partners:
vorB
2-oxoisovalerate ferredoxin oxidoreductase, beta subunit.
 
 0.999
vorC
2-oxoisovalerate ferredoxin oxidoreductase, gamma subunit.
 
 
 0.997
ilvE
Branched chain amino acid aminotransferase; Acts on leucine, isoleucine and valine. Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family.
    
 0.915
MA_2912
AMP-binding protein.
 
  
 0.886
MA_2914
Transcriptional regulator, Hth-3 family.
 
  
 0.863
MA_3076
2-oxoacid ferredoxin oxidoreductase, subunit beta.
 
 
0.859
porB
Pyruvate synthase, subunit beta.
  
 
 0.820
porB-2
Pyruvate synthase, beta subunit.
  
 
 0.820
MA_3075
2-oxoacid ferredoxin oxidoreductase, subunit alpha.
 
 
0.809
porA
Pyruvate synthase, subunit alpha.
  
 
 0.739
Your Current Organism:
Methanosarcina acetivorans
NCBI taxonomy Id: 188937
Other names: M. acetivorans C2A, Methanosarcina acetivorans C2A, Methanosarcina acetivorans str. C2A
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