STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MA_2933Conserved hypothetical protein. (496 aa)    
Predicted Functional Partners:
MA_2175
Membrane-bound galactosyl-transferase.
 
 
 
 0.761
MA_3755
Lipopolysaccharide transferase family protein.
 
 
 
 0.760
MA_3682
Conserved hypothetical protein.
 
 
 
 0.756
MA_2345
LPS biosynthesis related protein.
 
 
 
 0.754
MA_1183
1,2-diacylglycerol 3-glucosyltransferase.
 
 
 
 0.753
MA_0798
N-acetylglucosaminyl-phosphatidylinositol biosynthetic protein.
 
 
 
 0.750
MA_1061
Polysaccharide biosynthesis protein.
   
 
 0.716
MA_1062
Polysaccharide biosynthesis protein.
   
 
 0.716
MA_1175
Mannosyltransferase.
   
 
 0.716
MA_1179
Glycosyltransferase.
   
 
 0.716
Your Current Organism:
Methanosarcina acetivorans
NCBI taxonomy Id: 188937
Other names: M. acetivorans C2A, Methanosarcina acetivorans C2A, Methanosarcina acetivorans str. C2A
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.