Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
MA_2939Hypothetical protein. (609 aa)    
Predicted Functional Partners:
modC
Molybdenum ABC transporter, ATP-binding protein.
 
    
0.911
MA_3957
ABC transporter, ATP-binding protein.
   
0.831
MA_2888
Histone deacetylase.
  
 0.794
MA_0087
DnaK protein.
 
 0.770
hsp70
Heat shock protein 70; Acts as a chaperone.
 
 0.756
MA_0088
DnaJ protein.
 
 
 0.740
MA_3919
Iron ABC transporter, ATP-binding protein.
  
0.675
pan
Proteasome-activating nucleotidase; Belongs to the AAA ATPase family.
 
 
 0.673
MA_2744
Predicted protein.
  
 0.672
MA_1736
Mov34 family protein.
  
 0.669
Your Current Organism:
Methanosarcina acetivorans
NCBI taxonomy Id: 188937
Other names: M. acetivorans C2A, Methanosarcina acetivorans C2A, Methanosarcina acetivorans str. C2A
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