STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MA_3080Conserved hypothetical protein. (171 aa)    
Predicted Functional Partners:
MA_3079
Conserved hypothetical protein.
  
 
 0.968
MA_3059
Conserved hypothetical protein.
  
 
 0.867
flaH-2
Flagella accessory protein H.
  
  
 0.672
flaJ-2
Flagella accessory protein J.
  
  
 0.624
flaI-2
Flagella accessory protein I.
  
  
 0.611
flaB-3
Flagellin; Flagellin is the subunit protein which polymerizes to form the filaments of archaeal flagella.
  
  
 0.538
MA_3078
Conserved hypothetical protein.
       0.461
flaJ
Flagella accessory protein J.
  
  
 0.422
flaH
Flagella accessory protein H.
  
  
 0.414
cheY2
Chemotaxis response regulator.
  
  
 0.402
Your Current Organism:
Methanosarcina acetivorans
NCBI taxonomy Id: 188937
Other names: M. acetivorans C2A, Methanosarcina acetivorans C2A, Methanosarcina acetivorans str. C2A
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.