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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MA_3151Conserved hypothetical protein. (290 aa)    
Predicted Functional Partners:
MA_2212
Conserved hypothetical protein.
  
     0.703
MA_0359
Conserved hypothetical protein.
  
     0.700
MA_2207
Conserved hypothetical protein.
  
     0.697
MA_2057
Conserved hypothetical protein.
  
     0.683
MA_4622
Conserved hypothetical protein.
  
     0.650
cdc6-2
Cell division control protein 6, subunit A; Involved in regulation of DNA replication.
 
     0.544
nac
Conserved hypothetical protein; Contacts the emerging nascent chain on the ribosome. Belongs to the NAC-alpha family.
 
     0.517
MA_0893
Conserved hypothetical protein.
  
     0.514
MA_0709
Conserved hypothetical protein.
 
     0.498
pheA
Chorismate mutase/prephenate dehydratase.
       0.497
Your Current Organism:
Methanosarcina acetivorans
NCBI taxonomy Id: 188937
Other names: M. acetivorans C2A, Methanosarcina acetivorans C2A, Methanosarcina acetivorans str. C2A
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.