STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
alkADNA-3-methyladenine glycosylase II. (299 aa)    
Predicted Functional Partners:
MA_2077
DNA-(apurinic or apyrimidinic site) lyase.
 
 
 0.761
MA_3548
Conserved hypothetical protein.
   
 
 0.731
MA_3219
Predicted protein.
   
 0.730
MA_0096
Helicase.
    
 
 0.701
dbh
DNA-damage-inducible protein P; Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis.
 
 
 0.694
MA_0189
Helicase (SNF2 family).
 
 
 0.692
nfeD
Nodulation protein NfeD.
 
     0.672
MA_0974
Predicted protein.
  
 
 0.654
MA_0916
Erythrocyte band 7 integral membrane protein.
  
    0.615
MA_3206
Conserved hypothetical protein.
  
  
 0.612
Your Current Organism:
Methanosarcina acetivorans
NCBI taxonomy Id: 188937
Other names: M. acetivorans C2A, Methanosarcina acetivorans C2A, Methanosarcina acetivorans str. C2A
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