STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MA_3208Predicted protein. (221 aa)    
Predicted Functional Partners:
MA_1028
Long-chain fatty-acid-CoA ligase.
   
 
 0.723
MA_1422
Long-chain fatty-acid-CoA ligase.
   
 
 0.723
MA_3717
Long-chain fatty-acid-CoA ligase.
   
 
 0.723
MA_0165
Conserved hypothetical protein.
  
  
 0.573
MA_1597
Conserved hypothetical protein.
 
  
 0.543
MA_0108
Glyoxalase.
  
  
 0.507
MA_1162
Conserved hypothetical protein.
 
  
 0.474
MA_0667
Conserved hypothetical protein.
 
  
 0.440
MA_0846
ABC-2 type transporter.
  
  
 0.440
MA_0867
Multidrug ABC transporter, permease protein.
  
  
 0.440
Your Current Organism:
Methanosarcina acetivorans
NCBI taxonomy Id: 188937
Other names: M. acetivorans C2A, Methanosarcina acetivorans C2A, Methanosarcina acetivorans str. C2A
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.