Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ocdOrnithine cyclodeaminase; Catalyzes the NAD(+)-dependent oxidative deamination of L- alanine to pyruvate, and the reverse reaction, the reductive amination of pyruvate; Belongs to the ornithine cyclodeaminase/mu-crystallin family. Archaeal alanine dehydrogenase subfamily. (326 aa)    
Predicted Functional Partners:
pycB
Pyruvate carboxylase subunit B.
 
  
  0.825
pycA
Pyruvate carboxylase subunit A.
    
  0.815
porA
Pyruvate synthase, subunit alpha.
    
 0.812
MA_3075
2-oxoacid ferredoxin oxidoreductase, subunit alpha.
    
 0.812
pyk
Pyruvate kinase; Belongs to the pyruvate kinase family.
    
 0.810
MA_1735
Malate dehydrogenase (oxaloacetate decarboxylating).
    
 0.809
porD
Pyruvate synthase, subunit delta.
    
  0.803
porB
Pyruvate synthase, subunit beta.
    
  0.802
porB-2
Pyruvate synthase, beta subunit.
    
  0.802
MA_3076
2-oxoacid ferredoxin oxidoreductase, subunit beta.
    
  0.802
Your Current Organism:
Methanosarcina acetivorans
NCBI taxonomy Id: 188937
Other names: M. acetivorans C2A, Methanosarcina acetivorans C2A, Methanosarcina acetivorans str. C2A
Server load: low (14%) [HD]