Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
MA_1103 | MA_1172 | Integral membrane protein. | Oligosaccharyltransferase. | 0.676 |
MA_1103 | MA_2449 | Integral membrane protein. | Sterol-regulatory element-binding protein intramembrane protease. | 0.683 |
MA_1103 | MA_3014 | Integral membrane protein. | Conserved hypothetical protein. | 0.682 |
MA_1103 | MA_3302 | Integral membrane protein. | Conserved hypothetical protein. | 0.578 |
MA_1103 | MA_3752 | Integral membrane protein. | Transmembrane oligosaccharyl transferase. | 0.737 |
MA_1103 | MA_3753 | Integral membrane protein. | Transmembrane oligosaccharyl transferase. | 0.740 |
MA_1103 | MA_3754 | Integral membrane protein. | Transmembrane oligosaccharyl transferase. | 0.739 |
MA_1103 | MA_3884 | Integral membrane protein. | Conserved hypothetical protein. | 0.732 |
MA_1103 | MA_4000 | Integral membrane protein. | Conserved hypothetical protein. | 0.713 |
MA_1172 | MA_1103 | Oligosaccharyltransferase. | Integral membrane protein. | 0.676 |
MA_1172 | MA_2449 | Oligosaccharyltransferase. | Sterol-regulatory element-binding protein intramembrane protease. | 0.708 |
MA_1172 | MA_3014 | Oligosaccharyltransferase. | Conserved hypothetical protein. | 0.621 |
MA_1172 | MA_3302 | Oligosaccharyltransferase. | Conserved hypothetical protein. | 0.637 |
MA_1172 | MA_3884 | Oligosaccharyltransferase. | Conserved hypothetical protein. | 0.686 |
MA_1172 | MA_4000 | Oligosaccharyltransferase. | Conserved hypothetical protein. | 0.677 |
MA_2449 | MA_1103 | Sterol-regulatory element-binding protein intramembrane protease. | Integral membrane protein. | 0.683 |
MA_2449 | MA_1172 | Sterol-regulatory element-binding protein intramembrane protease. | Oligosaccharyltransferase. | 0.708 |
MA_2449 | MA_3014 | Sterol-regulatory element-binding protein intramembrane protease. | Conserved hypothetical protein. | 0.631 |
MA_2449 | MA_3302 | Sterol-regulatory element-binding protein intramembrane protease. | Conserved hypothetical protein. | 0.634 |
MA_2449 | MA_3752 | Sterol-regulatory element-binding protein intramembrane protease. | Transmembrane oligosaccharyl transferase. | 0.743 |
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