MA_3404 protein (Methanosarcina acetivorans)

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Score

MA_3404

GTPase. (254 aa)

Predicted Functional Partners:

MA_1390

0.975

MA_0340

0.944

truB

0.941

rpl30

0.937

fibM

0.930

rps8e

0.929

rpl10

0.926

rrmJ

0.922

rpl18

0.908

deaD

0.906

Your Current Organism:

Methanosarcina acetivorans

NCBI taxonomy Id: 188937
Other names: M. acetivorans C2A, Methanosarcina acetivorans C2A, Methanosarcina acetivorans str. C2A

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
MA_0340	MA_1390	MA_0340	MA_1390	Nop56-like protein.	GTP-binding protein.	0.981
MA_0340	MA_3404	MA_0340	MA_3404	Nop56-like protein.	GTPase.	0.944
MA_0340	deaD	MA_0340	MA_3956	Nop56-like protein.	ATP-dependent RNA helicase; Belongs to the DEAD box helicase family.	0.879
MA_0340	fibM	MA_0340	MA_0341	Nop56-like protein.	Fibrillarin; Involved in pre-rRNA and tRNA processing. Utilizes the methyl donor S-adenosyl-L-methionine to catalyze the site-specific 2'-hydroxyl methylation of ribose moieties in rRNA and tRNA. Site specificity is provided by a guide RNA that base pairs with the substrate. Methylation occurs at a characteristic distance from the sequence involved in base pairing with the guide RNA; Belongs to the methyltransferase superfamily. Fibrillarin family.	0.999
MA_0340	rpl10	MA_0340	MA_4276	Nop56-like protein.	Acidic ribosomal protein P0-like protein; Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors. Belongs to the universal ribosomal protein uL10 family.	0.955
MA_0340	rpl18	MA_0340	MA_1091	Nop56-like protein.	Ribosomal protein L18p; This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance.	0.969
MA_0340	rpl30	MA_0340	MA_1093	Nop56-like protein.	Ribosomal protein L30p.	0.918
MA_0340	rps8e	MA_0340	MA_0923	Nop56-like protein.	Ribosomal protein S8e.	0.959
MA_0340	rrmJ	MA_0340	MA_1288	Nop56-like protein.	23S RNA methyltransferase J; Specifically methylates the uridine in position 2552 of 23S rRNA at the 2'-O position of the ribose in the fully assembled 50S ribosomal subunit.	0.975
MA_0340	truB	MA_0340	MA_1105	Nop56-like protein.	rRNA pseudouridine synthase; Could be responsible for synthesis of pseudouridine from uracil-55 in the psi GC loop of transfer RNAs; Belongs to the pseudouridine synthase TruB family. Type 2 subfamily.	0.998
MA_1390	MA_0340	MA_1390	MA_0340	GTP-binding protein.	Nop56-like protein.	0.981
MA_1390	MA_3404	MA_1390	MA_3404	GTP-binding protein.	GTPase.	0.975
MA_1390	deaD	MA_1390	MA_3956	GTP-binding protein.	ATP-dependent RNA helicase; Belongs to the DEAD box helicase family.	0.892
MA_1390	fibM	MA_1390	MA_0341	GTP-binding protein.	Fibrillarin; Involved in pre-rRNA and tRNA processing. Utilizes the methyl donor S-adenosyl-L-methionine to catalyze the site-specific 2'-hydroxyl methylation of ribose moieties in rRNA and tRNA. Site specificity is provided by a guide RNA that base pairs with the substrate. Methylation occurs at a characteristic distance from the sequence involved in base pairing with the guide RNA; Belongs to the methyltransferase superfamily. Fibrillarin family.	0.912
MA_1390	rpl10	MA_1390	MA_4276	GTP-binding protein.	Acidic ribosomal protein P0-like protein; Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors. Belongs to the universal ribosomal protein uL10 family.	0.965
MA_1390	rpl18	MA_1390	MA_1091	GTP-binding protein.	Ribosomal protein L18p; This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance.	0.898
MA_1390	rpl30	MA_1390	MA_1093	GTP-binding protein.	Ribosomal protein L30p.	0.969
MA_1390	rps8e	MA_1390	MA_0923	GTP-binding protein.	Ribosomal protein S8e.	0.986
MA_1390	rrmJ	MA_1390	MA_1288	GTP-binding protein.	23S RNA methyltransferase J; Specifically methylates the uridine in position 2552 of 23S rRNA at the 2'-O position of the ribose in the fully assembled 50S ribosomal subunit.	0.955
MA_1390	truB	MA_1390	MA_1105	GTP-binding protein.	rRNA pseudouridine synthase; Could be responsible for synthesis of pseudouridine from uracil-55 in the psi GC loop of transfer RNAs; Belongs to the pseudouridine synthase TruB family. Type 2 subfamily.	0.909