STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MA_3453Iron ABC transporter, ATP-binding protein. (292 aa)    
Predicted Functional Partners:
MA_3452
Iron ABC transporter, permease.
 
 
 0.954
hemU-2
iron(III) ABC transporter, permease.
 
 
 0.894
MA_2774
Iron ABC transporter, permease.
 
 
 0.891
MA_3451
Iron ABC transporter, solute-binding protein.
 
 
 0.890
hemU-3
Hemin ABC transporter, permease protein.
 
 
 0.890
fecD
Fe(III) dicitrate ABC transporter, permease.
 
 
 0.884
MA_3359
iron(III) ABC transporter, permease protein.
 
 
 0.882
MA_3641
Iron ABC transporter, permease.
 
 
 0.882
hemU
Hemin permease.
 
 
 0.877
MA_1131
Iron ABC transporter, permease protein.
 
 
 0.842
Your Current Organism:
Methanosarcina acetivorans
NCBI taxonomy Id: 188937
Other names: M. acetivorans C2A, Methanosarcina acetivorans C2A, Methanosarcina acetivorans str. C2A
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.