Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
MA_3508 | rps11 | MA_3508 | MA_1110 | Predicted protein. | Ribosomal protein S11p; Located on the platform of the 30S subunit. Belongs to the universal ribosomal protein uS11 family. | 0.547 |
MA_3508 | rps12 | MA_3508 | MA_1259 | Predicted protein. | Ribosomal protein S12p; With S4 and S5 plays an important role in translational accuracy. Located at the interface of the 30S and 50S subunits. Belongs to the universal ribosomal protein uS12 family. | 0.673 |
MA_3508 | rps15 | MA_3508 | MA_0949 | Predicted protein. | Ribosomal protein S15p. | 0.669 |
MA_3508 | rps24e | MA_3508 | MA_3695 | Predicted protein. | Ribosomal protein S24e; Belongs to the eukaryotic ribosomal protein eS24 family. | 0.701 |
MA_3508 | rps3ae | MA_3508 | MA_3416 | Predicted protein. | Ribosomal protein S3Ae; Belongs to the eukaryotic ribosomal protein eS1 family. | 0.677 |
MA_3508 | rps4 | MA_3508 | MA_1109 | Predicted protein. | Ribosomal protein S4p; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit. | 0.589 |
MA_3508 | rps4e | MA_3508 | MA_1084 | Predicted protein. | Ribosomal protein S4e; Belongs to the eukaryotic ribosomal protein eS4 family. | 0.671 |
MA_3508 | rps5 | MA_3508 | MA_1092 | Predicted protein. | Ribosomal protein S5; With S4 and S12 plays an important role in translational accuracy. | 0.772 |
MA_3508 | rps6e | MA_3508 | MA_1526 | Predicted protein. | Ribosomal protein S6e; Belongs to the eukaryotic ribosomal protein eS6 family. | 0.686 |
MA_3508 | rps8 | MA_3508 | MA_1087 | Predicted protein. | Ribosomal protein S8; One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit; Belongs to the universal ribosomal protein uS8 family. | 0.584 |
rps11 | MA_3508 | MA_1110 | MA_3508 | Ribosomal protein S11p; Located on the platform of the 30S subunit. Belongs to the universal ribosomal protein uS11 family. | Predicted protein. | 0.547 |
rps11 | rps12 | MA_1110 | MA_1259 | Ribosomal protein S11p; Located on the platform of the 30S subunit. Belongs to the universal ribosomal protein uS11 family. | Ribosomal protein S12p; With S4 and S5 plays an important role in translational accuracy. Located at the interface of the 30S and 50S subunits. Belongs to the universal ribosomal protein uS12 family. | 0.999 |
rps11 | rps15 | MA_1110 | MA_0949 | Ribosomal protein S11p; Located on the platform of the 30S subunit. Belongs to the universal ribosomal protein uS11 family. | Ribosomal protein S15p. | 0.999 |
rps11 | rps24e | MA_1110 | MA_3695 | Ribosomal protein S11p; Located on the platform of the 30S subunit. Belongs to the universal ribosomal protein uS11 family. | Ribosomal protein S24e; Belongs to the eukaryotic ribosomal protein eS24 family. | 0.999 |
rps11 | rps3ae | MA_1110 | MA_3416 | Ribosomal protein S11p; Located on the platform of the 30S subunit. Belongs to the universal ribosomal protein uS11 family. | Ribosomal protein S3Ae; Belongs to the eukaryotic ribosomal protein eS1 family. | 0.999 |
rps11 | rps4 | MA_1110 | MA_1109 | Ribosomal protein S11p; Located on the platform of the 30S subunit. Belongs to the universal ribosomal protein uS11 family. | Ribosomal protein S4p; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit. | 0.999 |
rps11 | rps4e | MA_1110 | MA_1084 | Ribosomal protein S11p; Located on the platform of the 30S subunit. Belongs to the universal ribosomal protein uS11 family. | Ribosomal protein S4e; Belongs to the eukaryotic ribosomal protein eS4 family. | 0.999 |
rps11 | rps5 | MA_1110 | MA_1092 | Ribosomal protein S11p; Located on the platform of the 30S subunit. Belongs to the universal ribosomal protein uS11 family. | Ribosomal protein S5; With S4 and S12 plays an important role in translational accuracy. | 0.999 |
rps11 | rps6e | MA_1110 | MA_1526 | Ribosomal protein S11p; Located on the platform of the 30S subunit. Belongs to the universal ribosomal protein uS11 family. | Ribosomal protein S6e; Belongs to the eukaryotic ribosomal protein eS6 family. | 0.999 |
rps11 | rps8 | MA_1110 | MA_1087 | Ribosomal protein S11p; Located on the platform of the 30S subunit. Belongs to the universal ribosomal protein uS11 family. | Ribosomal protein S8; One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit; Belongs to the universal ribosomal protein uS8 family. | 0.999 |
page 1 of 6