Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
MA_0087 | MA_3704 | MA_0087 | MA_3704 | DnaK protein. | TPR-domain containing protein. | 0.776 |
MA_0087 | hsp70 | MA_0087 | MA_1478 | DnaK protein. | Heat shock protein 70; Acts as a chaperone. | 0.902 |
MA_0087 | rpoK | MA_0087 | MA_0599 | DnaK protein. | DNA-directed RNA polymerase, subunit K; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal RpoK/eukaryotic RPB6 RNA polymerase subunit family. | 0.464 |
MA_0874 | MA_3704 | MA_0874 | MA_3704 | Predicted protein. | TPR-domain containing protein. | 0.756 |
MA_0874 | alaS | MA_0874 | MA_0194 | Predicted protein. | alanyl-tRNA synthetase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain. | 0.881 |
MA_0874 | alaXM | MA_0874 | MA_2014 | Predicted protein. | alanyl-tRNA synthetase domain protein; Functions in trans to edit the amino acid moiety from mischarged charged tRNA(Ala). | 0.881 |
MA_0874 | rpoH | MA_0874 | MA_1266 | Predicted protein. | DNA-directed RNA polymerase, subunit H; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal RpoH/eukaryotic RPB5 RNA polymerase subunit family. | 0.731 |
MA_0874 | rpoK | MA_0874 | MA_0599 | Predicted protein. | DNA-directed RNA polymerase, subunit K; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal RpoK/eukaryotic RPB6 RNA polymerase subunit family. | 0.702 |
MA_0874 | rpoP | MA_0874 | MA_4672 | Predicted protein. | DNA-directed RNA polymerase; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal RpoP/eukaryotic RPC10 RNA polymerase subunit family. | 0.690 |
MA_1519 | MA_3704 | MA_1519 | MA_3704 | WD-domain containing protein. | TPR-domain containing protein. | 0.810 |
MA_1519 | alaS | MA_1519 | MA_0194 | WD-domain containing protein. | alanyl-tRNA synthetase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain. | 0.881 |
MA_1519 | alaXM | MA_1519 | MA_2014 | WD-domain containing protein. | alanyl-tRNA synthetase domain protein; Functions in trans to edit the amino acid moiety from mischarged charged tRNA(Ala). | 0.881 |
MA_1519 | rpoH | MA_1519 | MA_1266 | WD-domain containing protein. | DNA-directed RNA polymerase, subunit H; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal RpoH/eukaryotic RPB5 RNA polymerase subunit family. | 0.769 |
MA_1519 | rpoK | MA_1519 | MA_0599 | WD-domain containing protein. | DNA-directed RNA polymerase, subunit K; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal RpoK/eukaryotic RPB6 RNA polymerase subunit family. | 0.751 |
MA_1519 | rpoP | MA_1519 | MA_4672 | WD-domain containing protein. | DNA-directed RNA polymerase; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal RpoP/eukaryotic RPC10 RNA polymerase subunit family. | 0.690 |
MA_3704 | MA_0087 | MA_3704 | MA_0087 | TPR-domain containing protein. | DnaK protein. | 0.776 |
MA_3704 | MA_0874 | MA_3704 | MA_0874 | TPR-domain containing protein. | Predicted protein. | 0.756 |
MA_3704 | MA_1519 | MA_3704 | MA_1519 | TPR-domain containing protein. | WD-domain containing protein. | 0.810 |
MA_3704 | alaS | MA_3704 | MA_0194 | TPR-domain containing protein. | alanyl-tRNA synthetase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain. | 0.780 |
MA_3704 | alaXM | MA_3704 | MA_2014 | TPR-domain containing protein. | alanyl-tRNA synthetase domain protein; Functions in trans to edit the amino acid moiety from mischarged charged tRNA(Ala). | 0.780 |
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