Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
MA_3753Transmembrane oligosaccharyl transferase. (850 aa)    
Predicted Functional Partners:
secE
Protein translocase SEC61 complex gamma subunit; Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation.
  
 
 0.884
rpl44e
Ribosomal protein L44e; Binds to the 23S rRNA.
 
 
   0.856
rpl18a
Ribosomal protein LX.
 
 
   0.837
MA_0114
Conserved hypothetical protein.
 
   
 0.792
rpl31e
Ribosomal protein L31e; Belongs to the eukaryotic ribosomal protein eL31 family.
 
 
 
 0.755
rpl32e
Ribosomal protein L32e; Belongs to the eukaryotic ribosomal protein eL32 family.
 
   0.750
MA_2449
Sterol-regulatory element-binding protein intramembrane protease.
 
   
 0.746
MA_3019
Conserved hypothetical protein.
 
  
  0.746
MA_3528
Conserved hypothetical protein.
  
     0.744
MA_0647
Predicted protein.
  
     0.741
Your Current Organism:
Methanosarcina acetivorans
NCBI taxonomy Id: 188937
Other names: M. acetivorans C2A, Methanosarcina acetivorans C2A, Methanosarcina acetivorans str. C2A
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