Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
MA_4145Endonuclease III. (152 aa)    
Predicted Functional Partners:
draG
ADP-ribosylglycohydrolase (dinitrogenase reductase activating glycohydrolase).
       0.715
MA_3994
BadF/BadG/BcrA/BcrD ATPase.
 
     0.657
MA_3993
Conserved hypothetical protein.
 
     0.651
MA_4617
Metallo-beta-lactamase.
       0.628
MA_3992
Conserved hypothetical protein.
       0.602
MA_3995
Conserved hypothetical protein.
       0.602
MA_3969
PcrB family protein; Prenyltransferase that catalyzes the transfer of the geranylgeranyl moiety of geranylgeranyl diphosphate (GGPP) to the C3 hydroxyl of sn-glycerol-1-phosphate (G1P). This reaction is the first ether-bond-formation step in the biosynthesis of archaeal membrane lipids.
       0.532
MA_3997
Conserved hypothetical protein; Belongs to the UPF0288 family.
       0.516
MA_3996
Conserved hypothetical protein.
 
     0.487
Your Current Organism:
Methanosarcina acetivorans
NCBI taxonomy Id: 188937
Other names: M. acetivorans C2A, Methanosarcina acetivorans C2A, Methanosarcina acetivorans str. C2A
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