Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
MA_4266Conserved hypothetical protein. (280 aa)    
Predicted Functional Partners:
mptD
Conserved hypothetical protein; Catalyzes the conversion of 7,8-dihydroneopterin (H2Neo) to 6-hydroxymethyl-7,8-dihydropterin (6-HMD).
 
     0.781
MA_3869
Conserved hypothetical protein.
 
     0.743
rpl40e
Ribosomal protein L40e; Belongs to the eukaryotic ribosomal protein eL40 family.
 
     0.737
MA_3684
Conserved hypothetical protein.
 
     0.736
tgt-2
Archaeosine tRNA-ribosyltransferase.
  
     0.695
MA_3857
Conserved hypothetical protein.
 
     0.679
MA_4040
Conserved hypothetical protein.
  
     0.656
rpl44e
Ribosomal protein L44e; Binds to the 23S rRNA.
 
     0.654
MA_4513
Conserved hypothetical protein.
  
     0.636
MA_0545
Conserved hypothetical protein.
  
     0.629
Your Current Organism:
Methanosarcina acetivorans
NCBI taxonomy Id: 188937
Other names: M. acetivorans C2A, Methanosarcina acetivorans C2A, Methanosarcina acetivorans str. C2A
Server load: medium (56%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.