Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
MA_4307EF hand family protein; Signaling or buffering/transport protein. (76 aa)    
Predicted Functional Partners:
MA_3330
Conserved hypothetical protein.
  
  
 0.573
traB
TraB family protein.
   
 
 0.566
rpl10e
Ribosomal protein L10e; Belongs to the universal ribosomal protein uL16 family.
  
 
 0.522
MA_0974
Predicted protein.
  
 
 0.519
dbh
DNA-damage-inducible protein P; Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis.
  
 
 0.519
MA_4306
TPR-domain containing protein.
  
 
 0.485
MA_3699
Cell surface protein.
  
  
 0.472
ribD
Riboflavin-specific deaminase.
  
  
 0.461
MA_1904
Hypothetical protein.
  
  
 0.445
MA_1678
H(+)-transporting ATPase.
  
 
 0.427
Your Current Organism:
Methanosarcina acetivorans
NCBI taxonomy Id: 188937
Other names: M. acetivorans C2A, Methanosarcina acetivorans C2A, Methanosarcina acetivorans str. C2A
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.