STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gldA-2Gliding motility protein. (285 aa)    
Predicted Functional Partners:
MA_4320
Conserved hypothetical protein.
 
  
 0.864
MA_2886
Cell surface protein.
  
 
 0.745
MA_1538
Conserved hypothetical protein.
  
 
 0.744
MA_1539
Conserved hypothetical protein.
  
 
 0.744
MA_1544
Conserved hypothetical protein.
  
 
 0.744
MA_1545
Conserved hypothetical protein.
  
 
 0.744
MA_1546
Conserved hypothetical protein.
  
 
 0.744
MA_1547
Conserved hypothetical protein.
  
 
 0.744
MA_4359
Conserved hypothetical protein.
  
 
 0.744
MA_2109
Multidrug ABC transporter, permease protein.
 
  
 0.670
Your Current Organism:
Methanosarcina acetivorans
NCBI taxonomy Id: 188937
Other names: M. acetivorans C2A, Methanosarcina acetivorans C2A, Methanosarcina acetivorans str. C2A
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.