Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
MA_4342Membrane associated ATPase; Probably part of an ABC transporter complex. Responsible for energy coupling to the transport system (By similarity). (283 aa)    
Predicted Functional Partners:
MA_4343
Cobalt transport family protein.
 
 0.996
ecfA
Membrane associated ATPase; ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates.
 
  
 
0.995
MA_4340
Biotin synthesis BioY protein.
 
 
 0.994
cbiQ-3
Cobalt ABC transporter, permease protein.
 
 0.974
MA_1419
Cobalt transport protein.
 
 0.970
cbiQ-4
Cobalt ABC transporter, permease protein.
 
 0.969
cbiQ
Cobalt ABC transporter, permease protein.
  
 0.965
cbiQ-2
ABC transporter, permease protein.
 
 0.962
fecE
Fe(III) dicitrate ABC transporter, ATP-binding protein.
  
0.924
fepC
Ferric transport protein.
 
  
 0.917
Your Current Organism:
Methanosarcina acetivorans
NCBI taxonomy Id: 188937
Other names: M. acetivorans C2A, Methanosarcina acetivorans C2A, Methanosarcina acetivorans str. C2A
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