STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
smtBEfflux system transcriptional regulator, ArsR family. (115 aa)    
Predicted Functional Partners:
MA_1342
P-type copper-transporting ATPase.
  
  
 0.849
MA_4345
Conserved hypothetical protein.
  
  
 0.837
arsM
ubiE/COQ5 methyltransferase; Catalyzes the transfer of a methyl group from AdoMet to arsenite, producing methylated arsenicals. Involved in the conversion of As(III) to a number of methylated products. Reduces the arsenic toxicity in the cell and may contribute to the global arsenic cycling. Belongs to the methyltransferase superfamily. Arsenite methyltransferase family.
     
 0.789
MA_2883
Conserved hypothetical protein.
      
 0.782
MA_4076
Transcriptional regulator, ArsR family.
 
   
 0.707
MA_1189
Trp repressor binding protein.
     
 0.602
MA_3784
Transcriptional regulator, ArsR family.
 
   
 0.597
MA_4346
Hypothetical protein (multi-domain).
  
  
 0.589
ccmB
Heme exporter protein B.
  
   
 0.553
cadA
Cadmium efflux ATPase.
  
  
 0.536
Your Current Organism:
Methanosarcina acetivorans
NCBI taxonomy Id: 188937
Other names: M. acetivorans C2A, Methanosarcina acetivorans C2A, Methanosarcina acetivorans str. C2A
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.