Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
MA_3270 | MA_3633 | MA_3270 | MA_3633 | Predicted protein. | Predicted protein. | 0.750 |
MA_3270 | ribD-2 | MA_3270 | MA_4367 | Predicted protein. | 5-amino-6-(5-phosphoribosylamino) uracil reductase. | 0.467 |
MA_3633 | MA_3270 | MA_3633 | MA_3270 | Predicted protein. | Predicted protein. | 0.750 |
MA_3633 | ribD-2 | MA_3633 | MA_4367 | Predicted protein. | 5-amino-6-(5-phosphoribosylamino) uracil reductase. | 0.405 |
MA_4365 | MA_4366 | MA_4365 | MA_4366 | Conserved hypothetical protein. | ABC transporter, ATP-binding protein. | 0.965 |
MA_4365 | ribD-2 | MA_4365 | MA_4367 | Conserved hypothetical protein. | 5-amino-6-(5-phosphoribosylamino) uracil reductase. | 0.550 |
MA_4366 | MA_4365 | MA_4366 | MA_4365 | ABC transporter, ATP-binding protein. | Conserved hypothetical protein. | 0.965 |
MA_4366 | ribD-2 | MA_4366 | MA_4367 | ABC transporter, ATP-binding protein. | 5-amino-6-(5-phosphoribosylamino) uracil reductase. | 0.550 |
ribD | ribD-2 | MA_4092 | MA_4367 | Riboflavin-specific deaminase. | 5-amino-6-(5-phosphoribosylamino) uracil reductase. | 0.900 |
ribD-2 | MA_3270 | MA_4367 | MA_3270 | 5-amino-6-(5-phosphoribosylamino) uracil reductase. | Predicted protein. | 0.467 |
ribD-2 | MA_3633 | MA_4367 | MA_3633 | 5-amino-6-(5-phosphoribosylamino) uracil reductase. | Predicted protein. | 0.405 |
ribD-2 | MA_4365 | MA_4367 | MA_4365 | 5-amino-6-(5-phosphoribosylamino) uracil reductase. | Conserved hypothetical protein. | 0.550 |
ribD-2 | MA_4366 | MA_4367 | MA_4366 | 5-amino-6-(5-phosphoribosylamino) uracil reductase. | ABC transporter, ATP-binding protein. | 0.550 |
ribD-2 | ribD | MA_4367 | MA_4092 | 5-amino-6-(5-phosphoribosylamino) uracil reductase. | Riboflavin-specific deaminase. | 0.900 |