Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
MA_1029 | MA_4450 | MA_1029 | MA_4450 | Hypothetical protein (multi-domain). | Polysaccharide biosynthesis protein. | 0.466 |
MA_1029 | idh | MA_1029 | MA_4448 | Hypothetical protein (multi-domain). | Myo-inositol 2-dehydrogenase. | 0.473 |
MA_1909 | MA_2186 | MA_1909 | MA_2186 | Hypothetical protein. | dTDP-glucose 4,6-dehydratase. | 0.981 |
MA_1909 | MA_4450 | MA_1909 | MA_4450 | Hypothetical protein. | Polysaccharide biosynthesis protein. | 0.569 |
MA_1909 | MA_4457 | MA_1909 | MA_4457 | Hypothetical protein. | UDP-glucose 6-dehydrogenase. | 0.862 |
MA_1909 | rfbB | MA_1909 | MA_3779 | Hypothetical protein. | dTDP-glucose 4,6-dehydratase. | 0.982 |
MA_1909 | rfbC | MA_1909 | MA_3780 | Hypothetical protein. | dTDP-4-dehydrorhamnose 3,5-epimerase; Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4-hexulose. Belongs to the dTDP-4-dehydrorhamnose 3,5-epimerase family. | 0.900 |
MA_2186 | MA_1909 | MA_2186 | MA_1909 | dTDP-glucose 4,6-dehydratase. | Hypothetical protein. | 0.981 |
MA_2186 | MA_4450 | MA_2186 | MA_4450 | dTDP-glucose 4,6-dehydratase. | Polysaccharide biosynthesis protein. | 0.569 |
MA_2186 | MA_4457 | MA_2186 | MA_4457 | dTDP-glucose 4,6-dehydratase. | UDP-glucose 6-dehydrogenase. | 0.831 |
MA_2186 | idh | MA_2186 | MA_4448 | dTDP-glucose 4,6-dehydratase. | Myo-inositol 2-dehydrogenase. | 0.708 |
MA_2186 | rfbB | MA_2186 | MA_3779 | dTDP-glucose 4,6-dehydratase. | dTDP-glucose 4,6-dehydratase. | 0.900 |
MA_2186 | rfbC | MA_2186 | MA_3780 | dTDP-glucose 4,6-dehydratase. | dTDP-4-dehydrorhamnose 3,5-epimerase; Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4-hexulose. Belongs to the dTDP-4-dehydrorhamnose 3,5-epimerase family. | 0.983 |
MA_3716 | MA_4450 | MA_3716 | MA_4450 | Conserved hypothetical protein. | Polysaccharide biosynthesis protein. | 0.473 |
MA_3716 | idh | MA_3716 | MA_4448 | Conserved hypothetical protein. | Myo-inositol 2-dehydrogenase. | 0.479 |
MA_4449 | MA_4450 | MA_4449 | MA_4450 | Predicted protein. | Polysaccharide biosynthesis protein. | 0.582 |
MA_4449 | idh | MA_4449 | MA_4448 | Predicted protein. | Myo-inositol 2-dehydrogenase. | 0.443 |
MA_4450 | MA_1029 | MA_4450 | MA_1029 | Polysaccharide biosynthesis protein. | Hypothetical protein (multi-domain). | 0.466 |
MA_4450 | MA_1909 | MA_4450 | MA_1909 | Polysaccharide biosynthesis protein. | Hypothetical protein. | 0.569 |
MA_4450 | MA_2186 | MA_4450 | MA_2186 | Polysaccharide biosynthesis protein. | dTDP-glucose 4,6-dehydratase. | 0.569 |
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