Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
oppA-7Oligopeptide ABC transporter, solute-binding protein. (592 aa)    
Predicted Functional Partners:
oppB-8
Oligopeptide ABC transporter, permease protein.
 
 
 0.928
oppC-7
Oligopeptide ABC transporter, permease protein.
 
 
 0.895
oppD-7
Oligopeptide ABC transporter, ATP-binding protein.
  
 
 0.814
fwdE-2
Formylmethanofuran dehydrogenase, subunit E.
 
     0.807
oppF-6
Oligopeptide ABC transporter, ATP-binding protein.
  
 
 0.802
oppB-2
Oligopeptide ABC transporter, permease protein.
 
 
 0.678
MA_2484
Peptide ABC transporter, permease protein.
 
 
 0.678
MA_2481
Peptide ABC transporter, permease protein.
 
 
 0.673
oppB-3
Oligopeptide ABC transporter, permease.
 
 
 0.671
dppC
Dipeptide ABC transporter, permease.
 
 
 0.612
Your Current Organism:
Methanosarcina acetivorans
NCBI taxonomy Id: 188937
Other names: M. acetivorans C2A, Methanosarcina acetivorans C2A, Methanosarcina acetivorans str. C2A
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.