STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MA_4604iron(III) ABC transporter, solute-binding protein HemV2. (371 aa)    
Predicted Functional Partners:
MA_4605
iron(III) ABC transporter, permease protein.
 
 
 0.953
MA_4606
iron(III) ABC transporter, ATP-binding protein.
 
 
 0.950
MA_1234
iron(III) ABC transporter, permease protein.
 
 
 0.852
MA_4533
Iron compounds ABC transporter, permease protein.
 
 
 0.851
MA_1199
Iron ABC transporter, permease protein.
 
 
 0.847
MA_1131
Iron ABC transporter, permease protein.
 
 
 0.834
fecD
Fe(III) dicitrate ABC transporter, permease.
 
 
 0.829
MA_1198
Iron ABC transporter, ATP-binding protein.
 
 
 0.825
MA_1233
iron(III) ABC transporter, ATP-binding protein.
 
 
 0.822
MA_2774
Iron ABC transporter, permease.
 
 
 0.811
Your Current Organism:
Methanosarcina acetivorans
NCBI taxonomy Id: 188937
Other names: M. acetivorans C2A, Methanosarcina acetivorans C2A, Methanosarcina acetivorans str. C2A
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