Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
MA_4658Conserved hypothetical protein. (257 aa)    
Predicted Functional Partners:
MA_4659
Conserved hypothetical protein; Belongs to the UPF0201 family.
 
    0.895
MA_4660
Conserved hypothetical protein; Belongs to the UPF0200 family.
       0.843
MA_4657
Conserved hypothetical protein.
       0.773
pstA-2
Phosphate ABC transporter, permease protein.
     
 0.630
pstB
Phosphate ABC transporter, ATP-binding protein; Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphate importer (TC 3.A.1.7) family.
     
 0.629
rnz
Metallo-beta-lactamase; Zinc phosphodiesterase, which displays some tRNA 3'- processing endonuclease activity. Probably involved in tRNA maturation, by removing a 3'-trailer from precursor tRNA; Belongs to the RNase Z family.
       0.628
hisC-2
Histidinol-phosphate aminotransferase.
     
 0.619
phoU
Phosphate transport system regulatory protein; Plays a role in the regulation of phosphate uptake.
       0.609
MA_2220
Conserved hypothetical protein.
  
     0.585
MA_2238
Conserved hypothetical protein.
  
     0.581
Your Current Organism:
Methanosarcina acetivorans
NCBI taxonomy Id: 188937
Other names: M. acetivorans C2A, Methanosarcina acetivorans C2A, Methanosarcina acetivorans str. C2A
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