STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OEK01052.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (491 aa)    
Predicted Functional Partners:
OEK01053.1
16S rRNA (uracil(1498)-N(3))-methyltransferase; Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit.
       0.559
OEK01054.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.555
OEK00446.1
Polysaccharide deacetylase-like protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
  0.520
OEK01762.1
Polysaccharide deacetylase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
  0.520
OEK01055.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.427
Your Current Organism:
Fabibacter sp. 4D4
NCBI taxonomy Id: 1889784
Other names: F. sp. 4D4
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