STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rbsC-2Ribose ABC transporter permease; Functions to transport ribose at high affinity; forms a complex with RbsA2C2B; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the binding-protein-dependent transport system permease family. (325 aa)    
Predicted Functional Partners:
AOH43055.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  0.888
AOH43054.1
D-xylose ABC transporter ATP-binding protein; With RbsBCD acts to import ribose into the cell; RbsA contains 2 ATP-binding domain; Derived by automated computational analysis using gene prediction method: Protein Homology.
  0.855
AOH42090.1
LacI family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
  0.838
AOH42168.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  0.785
AOH43672.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  0.763
AOH42547.1
Sugar ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  0.742
AOH44428.1
D-ribose ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  0.719
AOH43569.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  0.707
AOH43748.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  0.707
AOH44329.1
RbsB protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  0.696
Your Current Organism:
Anaerolineaceae
NCBI taxonomy Id: 1889813
Other names: A. bacterium oral taxon 439, Anaerolineaceae bacterium oral taxon 439
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.