STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
lytR3Cell envelope-related transcriptional attenuator, Cell envelope-related transcriptional attenuator domain, lytR_cpsA_psr: cell envelope-related function transcriptional attenuator common domain; Hypothetical protein. (334 aa)    
Predicted Functional Partners:
DW1_0188
S-layer homology domain, TrbC/VIRB2 family, lp_hng_hel_AbrB: transcriptional regulator, AbrB family; Hypothetical protein.
  
    0.662
tagO
Probable undecaprenyl-phosphate N-acetylglucosaminyl 1-phosphate transferase; UDP-GlcNAc:undecaprenyl-P GlcNAc 1-P transferase;, Glycosyl transferase, family 4; High confidence in function and specificity.
 
  
 0.611
DW1_2342
Polysaccharide pyruvyl transferase, CsaB, S_layer_CsaB: polysaccharide pyruvyl transferase CsaB; High confidence in function and specificity.
 
     0.592
DW1_2348
Hypothetical protein; Phosphodiester alpha-GlcNAcase, Predicted periplasmic protein (DUF2233).
 
     0.588
DW1_1882
Hypothetical protein; MgtE intracellular N domain, phageshock_pspB: phage shock protein B.
  
     0.572
DW1_1385
Uncharacterised protein family UPF0755, YceG-like family.
  
     0.551
DW1_1095
Cellulosome-anchoring protein; Flags: Precursor;, Tetratricopeptide-like helical, Tetratricopeptide repeat; Conserved hypothetical protein.
  
     0.522
DW1_0173
S-layer homology domain, S-layer homology domain, FRU: PTS system, Fru family, IIB component; Hypothetical protein.
  
     0.505
DW1_2341
N-acetylglucosaminyldiphosphoundecaprenol; Catalyzes the conversion of GlcNAc-PP-undecaprenol into ManNAc-GlcNAc-PP-undecaprenol, the first committed lipid intermediate in the de novo synthesis of teichoic acid.
 
   
 0.486
DW1_0190
Cell surface glycoprotein 2; S-layer protein 2; Flags: Precursor;, S-layer homology domain; Conserved hypothetical protein.
  
     0.464
Your Current Organism:
Proteiniborus sp. DW1
NCBI taxonomy Id: 1889883
Other names: P. sp. DW1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.