OOQ54740.1 protein (Streptomyces antibioticus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Current Organism:

Streptomyces antibioticus

NCBI taxonomy Id: 1890
Other names: ATCC 23879, ATCC 8663, Actinomyces antibioticus, BCRC 12164, CBS 478.48, CBS 659.68, CCM 3159, CCRC 12164, CCRC:12164, CECT 3225, DSM 40234, IFO 12838, IMET 40227, ISP 5234, JCM 4620, KCTC 9688, LMG 5966, LMG:5966, NBRC 12838, NCIMB 8504, NRRL B-2770, NRRL-ISP 5234, S. antibioticus, Streptomyces antibioticus subsp. antibioticus, VKM Ac-964

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc.

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
OOQ47578.1	OOQ52893.1	AFM16_33265	AFM16_11050	MFS transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Anthranilate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.439
OOQ47578.1	OOQ53796.1	AFM16_33265	AFM16_08520	MFS transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Methionine synthase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate.	0.537
OOQ47578.1	OOQ54740.1	AFM16_33265	AFM16_01460	MFS transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	MFS transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.659
OOQ48120.1	OOQ53796.1	AFM16_36685	AFM16_08520	MFS transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	Methionine synthase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate.	0.502
OOQ48120.1	OOQ54740.1	AFM16_36685	AFM16_01460	MFS transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	MFS transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.762
OOQ52893.1	OOQ47578.1	AFM16_11050	AFM16_33265	Anthranilate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	MFS transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.439
OOQ52893.1	OOQ54740.1	AFM16_11050	AFM16_01460	Anthranilate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	MFS transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.474
OOQ52893.1	OOQ55185.1	AFM16_11050	AFM16_04005	Anthranilate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.439
OOQ53796.1	OOQ47578.1	AFM16_08520	AFM16_33265	Methionine synthase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate.	MFS transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.537
OOQ53796.1	OOQ48120.1	AFM16_08520	AFM16_36685	Methionine synthase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate.	MFS transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.502
OOQ53796.1	OOQ54739.1	AFM16_08520	AFM16_01455	Methionine synthase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate.	2Fe-2S ferredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.455
OOQ53796.1	OOQ54740.1	AFM16_08520	AFM16_01460	Methionine synthase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate.	MFS transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.502
OOQ53796.1	OOQ55185.1	AFM16_08520	AFM16_04005	Methionine synthase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate.	Transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.537
OOQ54736.1	OOQ54737.1	AFM16_01440	AFM16_01445	Geranylgeranyl pyrophosphate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Phytoene dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.904
OOQ54736.1	OOQ54738.1	AFM16_01440	AFM16_01450	Geranylgeranyl pyrophosphate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Phytoene synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.973
OOQ54736.1	OOQ54739.1	AFM16_01440	AFM16_01455	Geranylgeranyl pyrophosphate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	2Fe-2S ferredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.829
OOQ54736.1	OOQ54740.1	AFM16_01440	AFM16_01460	Geranylgeranyl pyrophosphate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	MFS transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.471
OOQ54737.1	OOQ54736.1	AFM16_01445	AFM16_01440	Phytoene dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Geranylgeranyl pyrophosphate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.904
OOQ54737.1	OOQ54738.1	AFM16_01445	AFM16_01450	Phytoene dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Phytoene synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.999
OOQ54737.1	OOQ54739.1	AFM16_01445	AFM16_01455	Phytoene dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	2Fe-2S ferredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.921

page 1 of 3

Server load: low (20%) [HD]

Share

Network

Neighborhood

Experiments

Fusion

Databases

Co-occurrence

Textmining

Co-expression

© STRING Consortium 2026

Credits

Access

Info

About