Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| OOQ46840.1 | OOQ55079.1 | AFM16_28955 | AFM16_03415 | Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline. | Acetylglutamate kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.967 |
| OOQ46840.1 | OOQ55451.1 | AFM16_28955 | AFM16_03420 | Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline. | Amino acid acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.963 |
| OOQ46840.1 | argB | AFM16_28955 | AFM16_08115 | Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline. | Acetylglutamate kinase; Catalyzes the ATP-dependent phosphorylation of N-acetyl-L- glutamate; Belongs to the acetylglutamate kinase family. ArgB subfamily. | 0.966 |
| OOQ46840.1 | argC | AFM16_28955 | AFM16_08125 | Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline. | N-acetyl-gamma-glutamyl-phosphate reductase; Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde. Belongs to the NAGSA dehydrogenase family. Type 1 subfamily. | 0.989 |
| OOQ46840.1 | argD | AFM16_28955 | AFM16_08110 | Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline. | Acetylornithine aminotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. ArgD subfamily. | 0.969 |
| OOQ46840.1 | argG | AFM16_28955 | AFM16_17235 | Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline. | Argininosuccinate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the argininosuccinate synthase family. Type 2 subfamily. | 0.997 |
| OOQ46840.1 | argH | AFM16_28955 | AFM16_08080 | Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline. | Argininosuccinate lyase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.972 |
| OOQ46840.1 | argJ | AFM16_28955 | AFM16_08120 | Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline. | N-acetylglutamate synthase; Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis: the synthesis of N-acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate. Belongs to the ArgJ family. | 0.998 |
| OOQ46840.1 | argR | AFM16_28955 | AFM16_08105 | Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline. | Arginine repressor; Regulates arginine biosynthesis genes. | 0.979 |
| OOQ49464.1 | OOQ55451.1 | AFM16_24805 | AFM16_03420 | Fumarate hydratase; Catalyzes the reversible hydration of fumarate to (S)-malate. Belongs to the class-I fumarase family. | Amino acid acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.758 |
| OOQ49464.1 | argH | AFM16_24805 | AFM16_08080 | Fumarate hydratase; Catalyzes the reversible hydration of fumarate to (S)-malate. Belongs to the class-I fumarase family. | Argininosuccinate lyase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.933 |
| OOQ49464.1 | argJ | AFM16_24805 | AFM16_08120 | Fumarate hydratase; Catalyzes the reversible hydration of fumarate to (S)-malate. Belongs to the class-I fumarase family. | N-acetylglutamate synthase; Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis: the synthesis of N-acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate. Belongs to the ArgJ family. | 0.465 |
| OOQ55079.1 | OOQ46840.1 | AFM16_03415 | AFM16_28955 | Acetylglutamate kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline. | 0.967 |
| OOQ55079.1 | OOQ55451.1 | AFM16_03415 | AFM16_03420 | Acetylglutamate kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Amino acid acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.778 |
| OOQ55079.1 | argB | AFM16_03415 | AFM16_08115 | Acetylglutamate kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Acetylglutamate kinase; Catalyzes the ATP-dependent phosphorylation of N-acetyl-L- glutamate; Belongs to the acetylglutamate kinase family. ArgB subfamily. | 0.891 |
| OOQ55079.1 | argC | AFM16_03415 | AFM16_08125 | Acetylglutamate kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. | N-acetyl-gamma-glutamyl-phosphate reductase; Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde. Belongs to the NAGSA dehydrogenase family. Type 1 subfamily. | 0.999 |
| OOQ55079.1 | argD | AFM16_03415 | AFM16_08110 | Acetylglutamate kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Acetylornithine aminotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. ArgD subfamily. | 0.955 |
| OOQ55079.1 | argG | AFM16_03415 | AFM16_17235 | Acetylglutamate kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Argininosuccinate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the argininosuccinate synthase family. Type 2 subfamily. | 0.919 |
| OOQ55079.1 | argH | AFM16_03415 | AFM16_08080 | Acetylglutamate kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Argininosuccinate lyase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.970 |
| OOQ55079.1 | argJ | AFM16_03415 | AFM16_08120 | Acetylglutamate kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. | N-acetylglutamate synthase; Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis: the synthesis of N-acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate. Belongs to the ArgJ family. | 0.999 |
page 1 of 5