Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-occurrence
Co-expression
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[Homology]
Score
OOQ51148.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (421 aa)    
Predicted Functional Partners:
OOQ51149.1
Aerial mycelium formation protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.851
dtd
D-tyrosyl-tRNA(Tyr) deacylase; An aminoacyl-tRNA editing enzyme that deacylates mischarged D-aminoacyl-tRNAs. Also deacylates mischarged glycyl-tRNA(Ala), protecting cells against glycine mischarging by AlaRS. Acts via tRNA- based rather than protein-based catalysis; rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D- aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl- tRNA entities in vivo and helps enforce protein L-homochirality. Belongs to the DTD family.
       0.681
OOQ51971.1
DNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.644
OOQ55120.1
Asparaginase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.517
OOQ53768.1
Urea carboxylase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.516
OOQ54633.1
MFS transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.481
OOQ54952.1
MFS transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.481
OOQ55322.1
MFS transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.481
OOQ54343.1
MFS transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.481
OOQ54260.1
MFS transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.481
Your Current Organism:
Streptomyces antibioticus
NCBI taxonomy Id: 1890
Other names: ATCC 23879, ATCC 8663, Actinomyces antibioticus, BCRC 12164, CBS 478.48, CBS 659.68, CCM 3159, CCRC 12164, CCRC:12164, CECT 3225, DSM 40234, IFO 12838, IMET 40227, ISP 5234, JCM 4620, KCTC 9688, LMG 5966, LMG:5966, NBRC 12838, NCIMB 8504, NRRL B-2770, NRRL-ISP 5234, S. antibioticus, Streptomyces antibioticus subsp. antibioticus, VKM Ac-964
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