STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001746365_02986Unannotated protein. (1166 aa)    
Predicted Functional Partners:
GCA_001746365_00116
Unannotated protein.
  
    0.481
GCA_001746365_06429
Unannotated protein.
 
  
0.476
GCA_001746365_05111
Unannotated protein.
 
  
0.465
GCA_001746365_06430
Unannotated protein.
 
  
0.460
GCA_001746365_02984
Unannotated protein.
       0.457
GCA_001746365_05526
Unannotated protein.
  
   
0.455
GCA_001746365_04591
Unannotated protein.
   
    0.452
GCA_001746365_07663
Unannotated protein.
 
  
 0.443
GCA_001746365_04322
Unannotated protein.
   
    0.432
GCA_001746365_05550
Unannotated protein.
   
    0.432
Your Current Organism:
Streptomyces sp. LUP30
NCBI taxonomy Id: 1890285
Other names: S. sp. LUP30
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.