STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PROFUN_16573Carboxylic ester hydrolase; Belongs to the type-B carboxylesterase/lipase family. (651 aa)    
Predicted Functional Partners:
PROFUN_01557
Putative glycerophosphocholine phosphodiesterase Gde1.
    
 0.910
PROFUN_11471
Uncharacterized protein.
    
 0.860
PROFUN_05003
Nitrate reductase.
    
 0.850
PROFUN_05929
GP-PDE domain-containing protein.
    
  0.719
PROFUN_03123
Uncharacterized protein.
   
 0.642
PROFUN_06487
WD repeat-containing protein 43.
   
 0.536
PROFUN_03624
Nucleolar protein 58.
   
  0.534
PROFUN_05010
UTP20, small subunit (SSU) processome component.
   
  0.531
PROFUN_09950
Uncharacterized protein.
    
  0.522
PROFUN_05330
WD repeat-containing protein 75-like.
   
  0.522
Your Current Organism:
Planoprotostelium fungivorum
NCBI taxonomy Id: 1890364
Other names: P. fungivorum, Planoprotostelium fungivorum Hillmann, Ferling, Novohradska & Gloeckner 2017, Protostelium sp. Jena Gg-2016a
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.