STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PROFUN_16425VPS10 domain-containing protein. (496 aa)    
Predicted Functional Partners:
PROFUN_14049
Cyclin-G-associated kinase.
   
 0.999
PROFUN_08839
Clathrin light chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin light chain family.
    
 0.999
PROFUN_05275
ANTH domain-containing protein.
     
 0.990
PROFUN_14950
Clathrin heavy chain 1-like.
    
 0.980
PROFUN_14942
Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family.
    
 0.980
PROFUN_11217
Clathrin heavy chain.
    
 0.980
PROFUN_02857
DUF1681 domain-containing protein.
     
 0.978
PROFUN_12585
AP complex subunit beta.
     
 0.973
PROFUN_10828
AP complex subunit beta; Belongs to the adaptor complexes large subunit family.
     
 0.973
PROFUN_05594
Uncharacterized protein.
    
 0.749
Your Current Organism:
Planoprotostelium fungivorum
NCBI taxonomy Id: 1890364
Other names: P. fungivorum, Planoprotostelium fungivorum Hillmann, Ferling, Novohradska & Gloeckner 2017, Protostelium sp. Jena Gg-2016a
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.