STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PROFUN_03546Uncharacterized protein. (192 aa)    
Predicted Functional Partners:
PROFUN_08267
40S ribosomal protein S26; Belongs to the eukaryotic ribosomal protein eS26 family.
   
 
 0.970
PROFUN_04157
Bms1-type G domain-containing protein.
   
 
 0.808
PROFUN_11067
DNA-directed RNA polymerase I complex subunit Rpa43.
   
    0.803
PROFUN_07721
Ribosome biogenesis protein RPF2.
   
  
 0.795
PROFUN_07808
Uncharacterized protein.
   
 
 0.790
PROFUN_03153
Uncharacterized protein; Belongs to the NOB1 family.
   
  
 0.789
PROFUN_09853
U3 small nucleolar ribonucleoprotein IMP4.
   
    0.787
PROFUN_00863
Ribosomal protein L24-like protein.
   
  
 0.768
PROFUN_09937
Ribosome biogenesis regulatory protein; Involved in ribosomal large subunit assembly. Belongs to the RRS1 family.
   
  
 0.758
PROFUN_05213
Nucleolar protein 14.
   
  
 0.754
Your Current Organism:
Planoprotostelium fungivorum
NCBI taxonomy Id: 1890364
Other names: P. fungivorum, Planoprotostelium fungivorum Hillmann, Ferling, Novohradska & Gloeckner 2017, Protostelium sp. Jena Gg-2016a
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.