STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PROFUN_03907Phenylalanyl-tRNA synthetase beta chain-like. (605 aa)    
Predicted Functional Partners:
PROFUN_01966
Phenylalanine--tRNA ligase alpha subunit-like.
  
 0.999
PROFUN_01098
Phenylalanyl-tRNA synthetase.
  
 0.998
PROFUN_12339
EF1_GNE domain-containing protein.
 
 
    0.924
PROFUN_10089
40S ribosomal protein SA; Required for the assembly and/or stability of the 40S ribosomal subunit. Required for the processing of the 20S rRNA- precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits.
   
 
 0.904
PROFUN_04607
Transmembrane and coiled-coil domains 1.
 
      0.890
PROFUN_11995
KH type-2 domain-containing protein.
  
 
 0.869
PROFUN_00587
40S ribosomal protein S15; Belongs to the universal ribosomal protein uS19 family.
  
 
 0.869
PROFUN_07343
40S ribosomal protein S11.
  
 
 0.850
PROFUN_04134
Ribosomal_S13_N domain-containing protein.
  
 
 0.838
PROFUN_08890
Sortilin.
  
  
 0.825
Your Current Organism:
Planoprotostelium fungivorum
NCBI taxonomy Id: 1890364
Other names: P. fungivorum, Planoprotostelium fungivorum Hillmann, Ferling, Novohradska & Gloeckner 2017, Protostelium sp. Jena Gg-2016a
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.