STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PROFUN_15975DNA endonuclease RBBP8-like. (224 aa)    
Predicted Functional Partners:
PROFUN_05003
Nitrate reductase.
   
 0.918
PROFUN_12335
Uncharacterized protein.
     
 0.884
PROFUN_10075
Tryptophane synthase.
    
 0.866
PROFUN_11622
Nitrilase 1.
     
 0.836
PROFUN_08529
Haloalkane dehalogenase.
  
 0.803
PROFUN_04840
Putative epoxide hydrolase.
  
 0.803
PROFUN_02558
FHA domain-containing protein.
    
 0.759
PROFUN_07344
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
   
 0.697
PROFUN_06574
Double-strand break repair protein; Involved in DNA double-strand break repair (DSBR). Possesses single-strand endonuclease activity and double-strand-specific 3'-5' exonuclease activity. Also involved in meiotic DSB processing.
    
 0.681
PROFUN_05563
2Fe-2S ferredoxin-type domain-containing protein.
  
 0.653
Your Current Organism:
Planoprotostelium fungivorum
NCBI taxonomy Id: 1890364
Other names: P. fungivorum, Planoprotostelium fungivorum Hillmann, Ferling, Novohradska & Gloeckner 2017, Protostelium sp. Jena Gg-2016a
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.