STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PROFUN_09142FAD-binding PCMH-type domain-containing protein. (624 aa)    
Predicted Functional Partners:
PROFUN_05870
Malate synthase.
  
 
 0.895
PROFUN_04777
Cytochrome b2; Belongs to the cytochrome b5 family.
  
 0.878
PROFUN_05003
Nitrate reductase.
   
 0.708
PROFUN_02683
Peroxisomal (S)-2-hydroxy-acid oxidase.
  
 0.673
PROFUN_02073
Cytoplasmic protein; Belongs to the cytochrome b5 family.
   
 0.656
PROFUN_05551
NADH dehydrogenase subunit 8 (Mitochondrion).
   
 0.629
PROFUN_08005
Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial; Iron-sulfur protein (IP) subunit of succinate dehydrogenase (SDH) that is involved in complex II of the mitochondrial electron transport chain and is responsible for transferring electrons from succinate to ubiquinone (coenzyme Q).
    
 0.626
PROFUN_00092
Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial; Iron-sulfur protein (IP) subunit of succinate dehydrogenase (SDH) that is involved in complex II of the mitochondrial electron transport chain and is responsible for transferring electrons from succinate to ubiquinone (coenzyme Q).
    
 0.626
PROFUN_10332
Uncharacterized protein.
    
   0.600
PROFUN_04474
ETF domain-containing protein.
  
 
 0.577
Your Current Organism:
Planoprotostelium fungivorum
NCBI taxonomy Id: 1890364
Other names: P. fungivorum, Planoprotostelium fungivorum Hillmann, Ferling, Novohradska & Gloeckner 2017, Protostelium sp. Jena Gg-2016a
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