STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PROFUN_12883Uncharacterized protein. (565 aa)    
Predicted Functional Partners:
PROFUN_15231
WD_REPEATS_REGION domain-containing protein.
   
 0.605
PROFUN_05736
Mastigoneme-like protein.
    
 0.575
PROFUN_00584
40S ribosomal protein S14; Belongs to the universal ribosomal protein uS11 family.
   
  0.574
PROFUN_07645
Pescadillo homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the pescadillo family.
   
 0.573
PROFUN_09987
Ipi1_N domain-containing protein.
   
 0.571
PROFUN_05594
Uncharacterized protein.
   
 0.533
PROFUN_08010
Ribosome biogenesis protein bop1-like.
   
  0.526
PROFUN_02915
60S ribosomal protein L8.
    
 0.525
PROFUN_12476
CP-type G domain-containing protein.
   
  0.520
PROFUN_07619
Polynucleotide 5'-hydroxyl-kinase NOL9-like.
    
  0.510
Your Current Organism:
Planoprotostelium fungivorum
NCBI taxonomy Id: 1890364
Other names: P. fungivorum, Planoprotostelium fungivorum Hillmann, Ferling, Novohradska & Gloeckner 2017, Protostelium sp. Jena Gg-2016a
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.