STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PROFUN_14808BRO1 domain-containing protein. (365 aa)    
Predicted Functional Partners:
PROFUN_13630
Uncharacterized protein.
  
 
 0.644
PROFUN_02557
Uncharacterized protein.
  
   0.610
PROFUN_07807
tRNA pseudouridine synthase D.
    
 
 0.609
PROFUN_04077
Putative 50S ribosomal protein L17; Belongs to the bacterial ribosomal protein bL17 family.
   
   0.609
PROFUN_14136
KOW domain-containing protein.
   
   0.591
PROFUN_03957
SpoU_methylase domain-containing protein.
  
 
 0.582
PROFUN_07344
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
   
 
 0.579
PROFUN_14379
50S ribosomal protein L13.
  
   0.566
PROFUN_06845
50S ribosomal protein L3.
   
 
 0.566
PROFUN_13823
Mitochondrial GTPase 1.
   
 
 0.560
Your Current Organism:
Planoprotostelium fungivorum
NCBI taxonomy Id: 1890364
Other names: P. fungivorum, Planoprotostelium fungivorum Hillmann, Ferling, Novohradska & Gloeckner 2017, Protostelium sp. Jena Gg-2016a
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.