STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PROFUN_13373AB hydrolase-1 domain-containing protein. (350 aa)    
Predicted Functional Partners:
PROFUN_12341
O-acyltransferase.
   
 
 0.850
PROFUN_04622
Phosphatidate phosphatase LPIN1-like.
     
 0.848
PROFUN_02074
acidPPc domain-containing protein.
     
 0.840
PROFUN_07583
AB hydrolase-1 domain-containing protein.
  
  
 
0.832
PROFUN_12549
Uncharacterized protein.
   
 
 0.800
PROFUN_08592
Uncharacterized protein.
   
 
 0.800
PROFUN_10075
Tryptophane synthase.
    
 0.788
PROFUN_13144
Helicase ATP-binding domain-containing protein.
    
 0.757
PROFUN_05047
Fatty acyl-CoA synthetase.
    
 0.757
PROFUN_07677
Putative sterol O-acyltransferase; Belongs to the membrane-bound acyltransferase family.
   
 
 0.746
Your Current Organism:
Planoprotostelium fungivorum
NCBI taxonomy Id: 1890364
Other names: P. fungivorum, Planoprotostelium fungivorum Hillmann, Ferling, Novohradska & Gloeckner 2017, Protostelium sp. Jena Gg-2016a
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.